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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs7150735 chr14:39738354 C/A LOC647288 chr13:75811890-75814517:- -0.53 -9.93 3.02E-21 Box Plot
THCA rs71508040 chr10:51829836 C/G FAM21B chr10:47894023-47949412:+ 0.59 7.63 1.29E-13 Box Plot
THCA rs71509165 chr8:10140715 A/G SGK223 chr8:8175258-8244008:- -0.35 -6.36 4.74E-10 Box Plot
THCA rs71516576 chr8:10314011 A/G SGK223 chr8:8175258-8244008:- 0.39 6.28 7.75E-10 Box Plot
THCA rs7151835 chr14:39780827 G/A LOC647288 chr13:75811890-75814517:- -0.52 -9.58 5.15E-20 Box Plot
THCA rs71518539 chr8:11700437 C/T SGK223 chr8:8175258-8244008:- -0.38 -6.25 9.11E-10 Box Plot
THCA rs71518542 chr8:11782311 G/A SGK223 chr8:8175258-8244008:- 0.35 6.49 2.2E-10 Box Plot
THCA rs71518543 chr8:11782326 T/C SGK223 chr8:8175258-8244008:- 0.36 6.67 6.91E-11 Box Plot
THCA rs71518544 chr8:11782349 G/T SGK223 chr8:8175258-8244008:- 0.35 6.49 2.2E-10 Box Plot
THCA rs71518545 chr8:11782359 C/T SGK223 chr8:8175258-8244008:- 0.36 6.82 2.73E-11 Box Plot
THCA rs71518549 chr8:11790899 T/C SGK223 chr8:8175258-8244008:- -0.45 -8.32 9.23E-16 Box Plot
THCA rs7152028 chr14:39923244 A/G LOC647288 chr13:75811890-75814517:- -0.4 -7.26 1.56E-12 Box Plot
THCA rs7152341 chr14:39884605 G/A LOC647288 chr13:75811890-75814517:- -0.49 -8.82 2.09E-17 Box Plot
THCA rs7152935 chr14:39909255 C/T LOC647288 chr13:75811890-75814517:- -0.49 -8.81 2.35E-17 Box Plot
THCA rs7153074 chr14:39770729 C/T LOC647288 chr13:75811890-75814517:- 0.44 8.65 7.74E-17 Box Plot